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Molby: コミット

Molecular Modeling Software


コミットメタ情報

リビジョン8fb12016149992f705a60d85c779a11195b3d4d1 (tree)
日時2014-03-23 23:48:56
作者toshinagata1964 <toshinagata1964@a2be...>
コミッターtoshinagata1964

ログメッセージ

mopac6 is no longer bundled.

git-svn-id: svn+ssh://svn.sourceforge.jp/svnroot/molby/trunk@487 a2be9bc6-48de-4e38-9406-05402d4bc13c

変更サマリ

差分

--- a/Makefile
+++ b/Makefile
@@ -76,9 +76,6 @@ $(DESTPREFIX) :
7676 amber11 : ../amber11/src/antechamber/*.[ch] ../amber11/src/sqm/*.f ../amber11/src/config.h
7777 make -f ../Makefile_amber11
7878
79-mopac/mopac606$(EXE_SUFFIX) :
80- make -f ../Makefile_mopac606_nbo
81-
8279 ortep3/ortep3$(EXE_SUFFIX) :
8380 make -f ../Makefile_ortep3
8481
@@ -140,7 +137,7 @@ endif
140137 $(CC) -c buildInfo.c -o $(DESTPREFIX)/buildInfo.o $(CFLAGS)
141138 $(CPP) -o $@ $(DESTOBJECTS) $(DESTPREFIX)/buildInfo.o $(CFLAGS) $(LDFLAGS)
142139
143-$(DESTPREFIX)/$(PRODUCT) : $(DESTPREFIX)/$(EXECUTABLE) ../Scripts/*.rb amber11 mopac/mopac606$(EXE_SUFFIX) ortep3/ortep3$(EXE_SUFFIX)
140+$(DESTPREFIX)/$(PRODUCT) : $(DESTPREFIX)/$(EXECUTABLE) ../Scripts/*.rb amber11 ortep3/ortep3$(EXE_SUFFIX)
144141 ifeq ($(TARGET_PLATFORM),MAC)
145142 rm -rf $(DESTPREFIX)/$(PRODUCT)
146143 mkdir -p $(DESTPREFIX)/$(PRODUCT)/Contents/MacOS
@@ -149,7 +146,6 @@ ifeq ($(TARGET_PLATFORM),MAC)
149146 echo -n "APPL????" > $(DESTPREFIX)/$(PRODUCT)/Contents/PkgInfo
150147 cp -r ../Scripts $(DESTPREFIX)/$(PRODUCT)/Contents/Resources
151148 cp -r amber11 $(DESTPREFIX)/$(PRODUCT)/Contents/Resources
152- cp -r mopac $(DESTPREFIX)/$(PRODUCT)/Contents/Resources
153149 cp -r ortep3 $(DESTPREFIX)/$(PRODUCT)/Contents/Resources
154150 mkdir -p $(DESTPREFIX)/$(PRODUCT)/Contents/Resources/Scripts/lib
155151 for i in $(RUBY_EXTLIB); do cp $(RUBY_DIR)/lib/$$i $(DESTPREFIX)/$(PRODUCT)/Contents/Resources/Scripts/lib; done
@@ -162,7 +158,6 @@ ifeq ($(TARGET_PLATFORM),MSW)
162158 cp `which mingwm10.dll` $(DESTPREFIX)/$(PRODUCT_DIR)
163159 cp -r ../Scripts $(DESTPREFIX)/$(PRODUCT_DIR)
164160 cp -r amber11 $(DESTPREFIX)/$(PRODUCT_DIR)
165- cp -r mopac $(DESTPREFIX)/$(PRODUCT_DIR)
166161 cp -r ortep3 $(DESTPREFIX)/$(PRODUCT_DIR)
167162 mkdir -p $(DESTPREFIX)/$(PRODUCT_DIR)/Scripts/lib
168163 for i in $(RUBY_EXTLIB); do cp $(RUBY_DIR)/lib/$$i $(DESTPREFIX)/$(PRODUCT_DIR)/Scripts/lib; done
--- a/Scripts/mopac6.rb
+++ b/Scripts/mopac6.rb
@@ -18,6 +18,7 @@ class Molecule
1818 # Execute mopac6
1919 # inpname is the input file
2020 # mol (optional) is the molecule from which the MOPAC input was built.
21+ # Currently not used (mopac6 is not bundled)
2122 def Molecule.execute_mopac(inpname, mol = nil)
2223
2324 # MOPAC executable
@@ -138,14 +139,7 @@ class Molecule
138139 layout(1,
139140 item(:text, :title=>"MOPAC input"),
140141 item(:textview, :width=>480, :height=>200, :tag=>"mopac_commands"),
141- layout(2,
142- item(:text, :title=>"Action: "),
143- item(:radio, :title=>"Save only", :tag=>"save_only", :value=>1),
144- -1,
145- item(:radio, :title=>"Save and Run MOPAC", :tag=>"save_and_run")
146- )
147142 )
148- radio_group("save_only", "save_and_run")
149143 item_with_tag("mopac_commands")[:font] = [:fixed, 10]
150144 item_with_tag("mopac_commands")[:value] = mol.create_mopac
151145 }
@@ -160,9 +154,6 @@ class Molecule
160154 open(fname, "w") { |fp|
161155 fp.write(mop)
162156 }
163- if h["save_and_run"] == 1
164- Molecule.execute_mopac(fname, self)
165- end
166157 end
167158
168159 end
--- a/xcode-build/Molby.xcodeproj/project.pbxproj
+++ b/xcode-build/Molby.xcodeproj/project.pbxproj
@@ -76,7 +76,6 @@
7676 E4FC77BF183E4F3F0064FB2E /* Types.c in Sources */ = {isa = PBXBuildFile; fileRef = E4FC77A6183E4F3F0064FB2E /* Types.c */; };
7777 E4FC77D7183E4FFE0064FB2E /* Scripts in Resources */ = {isa = PBXBuildFile; fileRef = E4FC77D6183E4FFE0064FB2E /* Scripts */; };
7878 E4FC7802183E503E0064FB2E /* amber11 in Resources */ = {isa = PBXBuildFile; fileRef = E4FC77D8183E503E0064FB2E /* amber11 */; };
79- E4FC7809183E50710064FB2E /* mopac in Resources */ = {isa = PBXBuildFile; fileRef = E4FC7806183E50710064FB2E /* mopac */; };
8079 E4FC7811183E50DC0064FB2E /* Accelerate.framework in Frameworks */ = {isa = PBXBuildFile; fileRef = E4FC7810183E50DC0064FB2E /* Accelerate.framework */; };
8180 E4FC7838183E50F00064FB2E /* AGL.framework in Frameworks */ = {isa = PBXBuildFile; fileRef = E4FC7837183E50F00064FB2E /* AGL.framework */; };
8281 E4FC784C183E51180064FB2E /* Carbon.framework in Frameworks */ = {isa = PBXBuildFile; fileRef = E4FC7845183E51180064FB2E /* Carbon.framework */; };
@@ -187,7 +186,6 @@
187186 E4FC77D4183E4FF20064FB2E /* molby_icon.icns */ = {isa = PBXFileReference; lastKnownFileType = image.icns; name = molby_icon.icns; path = ../bitmaps/molby_icon.icns; sourceTree = SOURCE_ROOT; };
188187 E4FC77D6183E4FFE0064FB2E /* Scripts */ = {isa = PBXFileReference; lastKnownFileType = folder; name = Scripts; path = ../Scripts; sourceTree = SOURCE_ROOT; };
189188 E4FC77D8183E503E0064FB2E /* amber11 */ = {isa = PBXFileReference; lastKnownFileType = folder; path = amber11; sourceTree = SOURCE_ROOT; };
190- E4FC7806183E50710064FB2E /* mopac */ = {isa = PBXFileReference; lastKnownFileType = folder; path = mopac; sourceTree = SOURCE_ROOT; };
191189 E4FC7810183E50DC0064FB2E /* Accelerate.framework */ = {isa = PBXFileReference; lastKnownFileType = wrapper.framework; name = Accelerate.framework; path = /System/Library/Frameworks/Accelerate.framework; sourceTree = "<absolute>"; };
192190 E4FC7837183E50F00064FB2E /* AGL.framework */ = {isa = PBXFileReference; lastKnownFileType = wrapper.framework; name = AGL.framework; path = /System/Library/Frameworks/AGL.framework; sourceTree = "<absolute>"; };
193191 E4FC7845183E51180064FB2E /* Carbon.framework */ = {isa = PBXFileReference; lastKnownFileType = wrapper.framework; name = Carbon.framework; path = /System/Library/Frameworks/Carbon.framework; sourceTree = "<absolute>"; };
@@ -361,7 +359,6 @@
361359 E4FC77D4183E4FF20064FB2E /* molby_icon.icns */,
362360 E4FC77D6183E4FFE0064FB2E /* Scripts */,
363361 E4FC77D8183E503E0064FB2E /* amber11 */,
364- E4FC7806183E50710064FB2E /* mopac */,
365362 E4ACACE418C6D32300F08B67 /* ortep3 */,
366363 E4FC7C16183E54730064FB2E /* Molby-Info.plist */,
367364 );
@@ -515,7 +512,6 @@
515512 E4FC7F821840C22B0064FB2E /* molby_icon.icns in Resources */,
516513 E4FC77D7183E4FFE0064FB2E /* Scripts in Resources */,
517514 E4FC7802183E503E0064FB2E /* amber11 in Resources */,
518- E4FC7809183E50710064FB2E /* mopac in Resources */,
519515 E4ACACE718C6D32300F08B67 /* ortep3 in Resources */,
520516 );
521517 runOnlyForDeploymentPostprocessing = 0;
@@ -534,7 +530,7 @@
534530 );
535531 runOnlyForDeploymentPostprocessing = 0;
536532 shellPath = /bin/sh;
537- shellScript = "export TARGET_PLATFORM=MAC\nexport PATH=/usr/local/bin:$PATH\n(cd $PROJECT_DIR; sh ../record_build_date.sh --with-svn-status)\nif [ \"$BUILD_STYLE\" = \"Release\" ]; then\n (cd $PROJECT_DIR/..; /usr/bin/ruby \"update_version.rb\")\n (cd $PROJECT_DIR/../Documents; /usr/bin/ruby \"makedoc.rb\")\nfi\n(cd $PROJECT_DIR; make -f ../Makefile_amber11)\n(cd $PROJECT_DIR; make -f ../Makefile_mopac606_nbo)\n(cd $PROJECT_DIR; make -f ../Makefile_ortep3)\n";
533+ shellScript = "export TARGET_PLATFORM=MAC\nexport PATH=/usr/local/bin:$PATH\n(cd $PROJECT_DIR; sh ../record_build_date.sh --with-svn-status)\nif [ \"$BUILD_STYLE\" = \"Release\" ]; then\n (cd $PROJECT_DIR/..; /usr/bin/ruby \"update_version.rb\")\n (cd $PROJECT_DIR/../Documents; /usr/bin/ruby \"makedoc.rb\")\nfi\n(cd $PROJECT_DIR; make -f ../Makefile_amber11)\n(cd $PROJECT_DIR; make -f ../Makefile_ortep3)\n";
538534 };
539535 /* End PBXShellScriptBuildPhase section */
540536
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